Collaborative Computational Project in Synergistic Reconstruction for Biomedical Imaging

Training School for the Synergistic Image Reconstruction Framework (SIRF) and Core Imaging Library (CIL)

Monday, June 28, 2021 - 09:00 to Friday, July 16, 2021 - 12:00

An online training course will be provided for the image reconstruction, optimisation and regularisation software packages: Synergistic Image Reconstruction Framework (SIRF) and the Core Imaging Library (CIL). This course will be free (registration required) and of interest to attendees of the Fully3D conference which follows after the course. However, material will start at an introductory level for anyone beginning in the image reconstruction field with interest in software and computing.

This hands-on course will be delivered with pre-configured machines (e.g. Azure) and information for local deployment will be provided (e.g. Docker container).

Provisional Timetable (we anticipate sessions of 1-2 hours on the days listed below, with offline contact possibilities)

Date Event
Fri 9th April Registration opens
Tue 1st June Registration closes
Mon 14th June Release of training material
Mon 28th June Basic concepts. Acquisition models, forward projections, back (adjoint) projections, simple reconstruction, display.
Wed 30th June Optional support session.
Fri 2nd of July Wrap-up of topics for the week.
Mon 5th July Iterative Reconstruction and Regularisation
Wed 7th July Optional support session.
Fri 9th of July Wrap-up of topics for the week.
Mon 12th of July Advanced topics (topics under consideration: synergistic reconstruction, deep learning approaches, using your own data)
Wed 14th of July Optional support session.
Fri 16th of July Discussion of solutions and wrap-up.

CCP SyneRBI – links to SIRF

CCPi – links to CIL

Fully3D 2021